Re: [ptp-user] Using PTP with Sun Grid Engine(SGE) Scheduler

[Greg Watson <g.watson@xxxxxxxxxxxx>]

Hi Antelmo,

Sorry for not getting back to you sooner. The reason you can't click the run button is that there's an error on the application tab, most likely because you haven't yet selected an executable. Since you're actually using the script to launch the job, you can choose anything you like in the tab. I usually pick the script if it's on the remote machine, or the executable will do fine too.

I'll take a look at the other problems and get back to you shortly.

Cheers,
GReg

On Aug 28, 2012, at 2:25 PM, Antelmo Aguilar wrote:

> Hello Greg,
> 
> I am trying to do what you suggested, but I have not had any luck.   I tried changing the settings under "Grid Engine Settings", but I noticed that those settings default to to using bash, but we use cshell by default in our cluster.  Is there a way of changing the default shell?  I tried importing a script that I use to submit jobs, but I really have not had much success with it because after I import it and then I move to a different tab such as applications, the script that I imported gets removed from "Import Grid Engine Script".  I have attached two pictures that show what I get when I try to use the settings under "Grid Engine Settings" and when I try importing a script I have.  Also, for some reason the "Run" button is not clickable.  Do I need to setup the correct settings under resources first in order to be able to click "Run".  I really appreciate the help.
> 
> Thanks,
> Antelmo Aguilar
> ________________________________________
> From: ptp-user-bounces@xxxxxxxxxxx [ptp-user-bounces@xxxxxxxxxxx] On Behalf Of Greg Watson [g.watson@xxxxxxxxxxxx]
> Sent: Monday, August 20, 2012 1:31 PM
> To: PTP User list
> Subject: Re: [ptp-user] Using PTP with Sun Grid Engine(SGE) Scheduler
> 
> Hi Antelmo,
> 
> You need to use the 'Grid Engine-Generic-Batch' target system type when creating a run configuration. This should work with most GE implementations. If you want to manually configure monitoring for GE, switch to the System Monitoring Perspective, and create a new monitor. For 'Monitor Type', choose 'Grid Engine'.
> 
> If this doesn't work for you system, you may need to import a configuration into your workspace, then customize the commands so they are correct. I can give you more information on this if necessary.
> 
> Regards,
> Greg
> 
> On Aug 15, 2012, at 3:00 PM, Antelmo Aguilar wrote:
> 
>> Hello everyone,
>> 
>> I have downloaded and updated PTP and I would like to set it up so that it can be used in our cluster.  I have looked in the documentation, but I have not seen any clear instructions on how to setup PTP with SGE,  I have see some reference to how to set it up with PBS, but nothing about SGE.  I would greatly appreciate some guidance in this issue.
>> 
>> Thank you,
>> Antelmo Aguilar
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