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When generating the javadoc, the classpath used to resolve references points to the javax.persistence 1.0 jar. However, the code reference to generate API pages for javax.persistence is the 2.0 preview source. This is because in 2.0 we have no access to the 1.0 source. Doug has confirmed that we DO want 1.0 to be used not 2.0. We cannot use both. That is unless it is acceptable to him to heavily document the 2.0 implimentation with javadoc info explicitly stating what has changed in 2.0, so that the 2.0 codebase could be used to generate for both.
The Eclipselink project has moved to Github: https://github.com/eclipse-ee4j/eclipselink