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During exit eclipse is saving the current window adjustments, preferences etc. It should be possible to save this options manually, because modifications are lost if Eclipse or the OS crashes.
For me it would just be enough to have these preferences saved automatically say every XX minutes. Using the workspace save interval preference would just be enough and add nothing to the interface. (but isn't is supposed to do so ?)
*** This bug has been marked as a duplicate of 72374 ***
Mistaken dup
*** This bug has been marked as a duplicate of 2369 ***
Please move your votes, I've marked this as a dup in comment #4