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As described in bug 226321#c6 where there is a jar that has an invalid signature, there is a "Security Exception" in the log, but nothing else leading to _which_ jar (or project) had the problem. Hence, it's impossible to track down.
Created attachment 97750 [details] simple patch to include jar name in the security exception
Buckminster should catch runtime exceptions from the update manager and log them. That way, Ganymatic would at least know what site it is that fails. I'll look into that (I don't have mylyn installed right now so I'm not able to create a bugzilla :-) ).
Looks like a useful addition. Andrew, can you release this?
done