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The file 'permissions.properties' that is used by Update to set executable bit on HP-UX shared libraries is not added to the build script. As a result, it is missing from the build and Update cannot set the permissions. This is a 2.0.1 blocker because Eclipse on HP-UX stops working as soon as it is updated to a newer version (*.sl libraries cannot be loaded).
Grant has fixed this but I'll let him close the PR.
Fixed and verified in test build this morning that permissions.properties file is in the plugins/org.eclipse.swt.motif_2.0.1 directory.