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Re: [science-iwg] Project recommendations

I would certainly love to, given Bio7 at least in in some bundles uses JSR-275 via JScience 4: http://bio7.org/?page_id=10

Werner 


On Wed, Apr 8, 2015 at 5:41 PM, <science-iwg-request@xxxxxxxxxxx> wrote:
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Today's Topics:

   1. Re: Project recommendations (UOMo)


----------------------------------------------------------------------

Message: 1
Date: Wed, 8 Apr 2015 17:40:38 +0200
From: UOMo <uomo@xxxxxxxxxxx>
To: science-iwg@xxxxxxxxxxx
Subject: Re: [science-iwg] Project recommendations
Message-ID:
        <CAAGawe2o9Q5xWJeohD-htBaYKoC=D8Hv6BCOwem=WsXMov8-fg@xxxxxxxxxxxxxx>
Content-Type: text/plain; charset="utf-8"

Well it was: licensed under the  EPL (since Bio7 1.6) and GPL (Bio7 1.5)

When I clicked on the link there was some page saying GPL or LGPL. Maybe
parts of the site still refer to 1.5?;-)

If Marcel is currently in Kiel, maybe I'll have a chat with him while I am
still in the area.

Werner

On Wed, Apr 8, 2015 at 5:32 PM, <science-iwg-request@xxxxxxxxxxx> wrote:

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> Today's Topics:
>
>    1. Re: Project recommendations (Jay Jay Billings)
>    2. Re: Project recommendations (Jay Jay Billings)
>    3. Re: Science Top Level Project (Ian Skerrett)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Wed, 8 Apr 2015 10:09:25 -0400
> From: Jay Jay Billings <jayjaybillings@xxxxxxxxx>
> To: Science Industry Working Group <science-iwg@xxxxxxxxxxx>,
>         maustenfeld@xxxxxxxxxxxxxx
> Subject: Re: [science-iwg] Project recommendations
> Message-ID:
>         <
> CAE3ybv5rdT2HQJDi8ycpASEHmJE8yUE2sOdbZDoKbAn6Nb6PiQ@xxxxxxxxxxxxxx>
> Content-Type: text/plain; charset="utf-8"
>
> Werner,
>
> Bio7 is released under EPL:
>
> http://bio7.org/?page_id=37
>
> Why do you think it is released under GPL?
>
> Jay
>
> On Wed, Apr 8, 2015 at 9:15 AM, UOMo <uomo@xxxxxxxxxxx> wrote:
>
> > Hi,
> >
> > Did you also bug Marcel about that license of Bio7?
> > GNU Library or Lesser General Public License version 2.0 (LGPLv2)
> > <http://sourceforge.net/directory/license:lgpl/>
> >
> > Java.net wrote about SCaVis earlier: http://jwork.org/scavis/overview
> > It looks very impressive. And while I can't say, how eager this "small
> > non-profit" would be to join a slightly larger one (Eclipse Foundation)
> the
> > remarks about a "business friendly version" of SCaVis under
> > http://jwork.org/scavis/index.php/license sound like that version could
> > also be EPL compatible.
> >
> > Regards,
> >
> > Werner
> >
> > [image: --]
> > Werner Keil
> > [image: https://]about.me/wernerkeil
> > <https://about.me/wernerkeil?promo=email_sig>
> >
> >
> > On Wed, Apr 8, 2015 at 3:04 PM, <science-iwg-request@xxxxxxxxxxx> wrote:
> >
> >> Send science-iwg mailing list submissions to
> >>         science-iwg@xxxxxxxxxxx
> >>
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> >>         https://dev.eclipse.org/mailman/listinfo/science-iwg
> >> or, via email, send a message with subject or body 'help' to
> >>         science-iwg-request@xxxxxxxxxxx
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> >> than "Re: Contents of science-iwg digest..."
> >>
> >>
> >> Today's Topics:
> >>
> >>    1. Re: Project recommendations (Ola Spjuth)
> >>    2. Re: Science Top Level Project (Ian Skerrett)
> >>
> >>
> >> ----------------------------------------------------------------------
> >>
> >> Message: 1
> >> Date: Wed, 8 Apr 2015 12:56:27 +0000
> >> From: Ola Spjuth <Ola.Spjuth@xxxxxxxxxxxxx>
> >> To: Science Industry Working Group <science-iwg@xxxxxxxxxxx>
> >> Subject: Re: [science-iwg] Project recommendations
> >> Message-ID: <0CFF4891-4447-4FFF-8F18-D90244435BA8@xxxxxxxxxxxxx>
> >> Content-Type: text/plain; charset="us-ascii"
> >>
> >> Hi Philip,
> >>
> >> Yes, we at the Bioclipse project are very keen on this (sorry for being
> >> silent lately). There are many things going on in our organization and
> we
> >> have amongst others started sketching on a rewrite towards Bioclipse 3.
> >> However there have been some setbacks with some personnel leaving and
> new
> >> recruitment, hopefully it will settle soon. As our core dependency is
> the
> >> mentioned CDK, it is crucial for us that this is also resolved.
> >>
> >> Kind regards,
> >>
> >> Ola
> >>
> >> On 8 apr 2015, at 12:25, Jay Jay Billings <jayjaybillings@xxxxxxxxx
> >> <mailto:jayjaybillings@xxxxxxxxx>> wrote:
> >>
> >>
> >> As far as Bio7 goes, we bugged Marcel to death about it at EclipseCon!
> >>
> >> Marcel, I think you are most likely reading this, so just know that I'm
> >> going to bug you about it more as soon as my classes are over. :-P
> >>
> >> Jay
> >>
> >> On Apr 8, 2015 4:29 AM, "Philip Wenig" <philip.wenig@xxxxxxxxxxxxxx
> >> <mailto:philip.wenig@xxxxxxxxxxxxxx>> wrote:
> >> Hi folks,
> >>
> >> I'd really like to see the following projects becoming official Eclipse
> >> projects under the Science umbrella:
> >>
> >> Bioclipse
> >> http://www.bioclipse.net<http://www.bioclipse.net/>
> >>
> >> The Chemistry Development Kit
> >> http://sourceforge.net/projects/cdk
> >>
> >> Bio7
> >> http://bio7.org<http://bio7.org/>
> >>
> >>
> >> Best,
> >> Philip
> >>
> >> --
> >> ~~~~~~~~~~~~~~~~~~~~~~~~
> >> Dr. Philip Wenig
> >>
> >> http://www.openchrom.net<http://www.openchrom.net/>
> >>
> >> https://www.xing.com/profile/Philip_Wenig
> >> http://de.linkedin.com/pub/philip-wenig/2a/4a8/877
> >> ~~~~~~~~~~~~~~~~~~~~~~~~
> >>
> >> _______________________________________________
> >> science-iwg mailing list
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> >> To change your delivery options, retrieve your password, or unsubscribe
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> >>
> >
> >
> > _______________________________________________
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>
>
> --
> Jay Jay Billings
> Oak Ridge National Laboratory
> Twitter Handle: @jayjaybillings
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> ------------------------------
>
> Message: 2
> Date: Wed, 8 Apr 2015 10:10:36 -0400
> From: Jay Jay Billings <jayjaybillings@xxxxxxxxx>
> To: Science Industry Working Group <science-iwg@xxxxxxxxxxx>
> Subject: Re: [science-iwg] Project recommendations
> Message-ID:
>         <CAE3ybv40+cz1MaSmdPeS-nEVoeVJB3u=
> zARsww_Z0Xey-0SBHw@xxxxxxxxxxxxxx>
> Content-Type: text/plain; charset="utf-8"
>
> Ola,
>
> Could you refresh my memory about the CDK issue?
>
> It would be great to see if the SWG can help resolve this and help you make
> the jump.
>
> Jay
>
> On Wed, Apr 8, 2015 at 8:56 AM, Ola Spjuth <Ola.Spjuth@xxxxxxxxxxxxx>
> wrote:
>
> >  Hi Philip,
> >
> >  Yes, we at the Bioclipse project are very keen on this (sorry for being
> > silent lately). There are many things going on in our organization and we
> > have amongst others started sketching on a rewrite towards Bioclipse 3.
> > However there have been some setbacks with some personnel leaving and new
> > recruitment, hopefully it will settle soon. As our core dependency is the
> > mentioned CDK, it is crucial for us that this is also resolved.
> >
> >  Kind regards,
> >
> >  Ola
> >
> >  On 8 apr 2015, at 12:25, Jay Jay Billings <jayjaybillings@xxxxxxxxx>
> > wrote:
> >
> >  As far as Bio7 goes, we bugged Marcel to death about it at EclipseCon!
> >
> > Marcel, I think you are most likely reading this, so just know that I'm
> > going to bug you about it more as soon as my classes are over. :-P
> >
> > Jay
> > On Apr 8, 2015 4:29 AM, "Philip Wenig" <philip.wenig@xxxxxxxxxxxxxx>
> > wrote:
> >
> >> Hi folks,
> >>
> >> I'd really like to see the following projects becoming official Eclipse
> >> projects under the Science umbrella:
> >>
> >> Bioclipse
> >> http://www.bioclipse.net
> >>
> >> The Chemistry Development Kit
> >> http://sourceforge.net/projects/cdk
> >>
> >> Bio7
> >> http://bio7.org
> >>
> >>
> >> Best,
> >> Philip
> >>
> >> --
> >> ~~~~~~~~~~~~~~~~~~~~~~~~
> >> Dr. Philip Wenig
> >>
> >> http://www.openchrom.net
> >>
> >> https://www.xing.com/profile/Philip_Wenig
> >> http://de.linkedin.com/pub/philip-wenig/2a/4a8/877
> >> ~~~~~~~~~~~~~~~~~~~~~~~~
> >>
> >> _______________________________________________
> >> science-iwg mailing list
> >> science-iwg@xxxxxxxxxxx
> >> To change your delivery options, retrieve your password, or unsubscribe
> >> from this list, visit
> >> https://dev.eclipse.org/mailman/listinfo/science-iwg
> >>
> >  _______________________________________________
> > science-iwg mailing list
> > science-iwg@xxxxxxxxxxx
> > To change your delivery options, retrieve your password, or unsubscribe
> > from this list, visit
> > https://dev.eclipse.org/mailman/listinfo/science-iwg
> >
> >
> >
> > _______________________________________________
> > science-iwg mailing list
> > science-iwg@xxxxxxxxxxx
> > To change your delivery options, retrieve your password, or unsubscribe
> > from this list, visit
> > https://dev.eclipse.org/mailman/listinfo/science-iwg
> >
>
>
>
> --
> Jay Jay Billings
> Oak Ridge National Laboratory
> Twitter Handle: @jayjaybillings
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> ------------------------------
>
> Message: 3
> Date: Wed, 08 Apr 2015 11:32:12 -0400
> From: Ian Skerrett <ian.skerrett@xxxxxxxxxxx>
> To: science-iwg@xxxxxxxxxxx
> Subject: Re: [science-iwg] Science Top Level Project
> Message-ID: <552549FC.9040309@xxxxxxxxxxx>
> Content-Type: text/plain; charset="windows-1252"; Format="flowed"
>
> FWIW, I know in Europe the Eclipse Foundation is applying for gov't
> funding to help fund open source community outreach for IoT. If the US
> Gov't is looking to fund open source development in Science is there a
> possibility for the Eclipse Foundation to participate in this funding
> process?
>
> Ian
>
>
> On 08/04/2015 10:06 AM, Jay Jay Billings wrote:
> > Ian,
> >
> > I think that would be extremely helpful.
> >
> > We haven't scheduled our next meeting yet, but we are trying to start
> > monthly steering committee calls, which I think are most dependent on
> > Andrew's schedule.
> >
> > I imagine that there will be a significant group of SWG members at
> > each EclipseCon NA, FR and Europe from here on out. We had a pretty
> > good group at EclipseCon NA a few weeks back and we all met on
> > Thursday night over dinner after a whole day of our talks.
> >
> > I think we need to plan to have meetings and mini-conferences separate
> > from EclipseCon too because most scientists simply won't attend
> > EclipseCon. Andrew, Greg and I are planning a BOF at Supercomputing
> > this year, which normally has 10000 people in attendance.
> >
> > My personal preference is that we actually establish fully virtual
> > business meetings separate from the conferences.
> >
> > Jay
> >
> > On Wed, Apr 8, 2015 at 9:04 AM, Ian Skerrett <ian.skerrett@xxxxxxxxxxx
> > <mailto:ian.skerrett@xxxxxxxxxxx>> wrote:
> >
> >     FWIW, I would be happy to discuss with the Science WG on how we
> >     can raise the profile of the technology. I think what you guys are
> >     doing is very cool. When is your next meeting?
> >
> >     Ian
> >
> >
> >
> >     On 08/04/2015 8:24 AM, Greg Watson wrote:
> >>     +1
> >>
> >>     If we want to build an ecosystem then a top level project is
> >>     essential. Why? So that, as Philip points out, we can espouse the
> >>     benefits of joining. Currently we?re asking people to pay money
> >>     to join the science iwg, but what do they get in return. Also,
> >>     there are some upcoming opportunities to source funding from the
> >>     US government, but unless we can demonstrate significant value
> >>     add it will be very hard to convince them it is a good idea.
> >>     Finally, I think this would raise the profile of science within
> >>     the foundation, and help us demonstrate that the technology
> >>     behind scientific computing can be just as important as other
> >>     technologies like iot or locationtech.
> >>
> >>     Greg
> >>
> >>>     On Apr 8, 2015, at 4:28 AM, Philip Wenig
> >>>     <philip.wenig@xxxxxxxxxxxxxx
> >>>     <mailto:philip.wenig@xxxxxxxxxxxxxx>> wrote:
> >>>
> >>>     Hi Mike, hi Jay,
> >>>
> >>>     yep, it would be great if more projects/companies/institutions
> >>>     would join. Anyhow, we're on a good a way so I think. But an
> >>>     experience I made when talking to people/projects is that it's
> >>>     not easy to describe the benefits of joining the Science WG in
> >>>     short words ... even though we are aware of its benefits. We
> >>>     possibly should discuss this point to find a better way of
> >>>     advertising our strength.
> >>>
> >>>     In a separate mail I will propose three projects I'd really like
> >>>     to see joining our working group. Maybe others could also make
> >>>     recommendations :-).
> >>>
> >>>
> >>>     Best,
> >>>     Philip
> >>>
> >>>     Am 07.04.2015 um 22:07 schrieb Jay Jay Billings:
> >>>>     Mike,
> >>>>
> >>>>     That's a very valuable $0.02. Thanks!
> >>>>
> >>>>     I think you are right and that the number of released projects
> >>>>     is a better criteria. (And we're not in a hurry.) We definitely
> >>>>     need more experience with the whole process.
> >>>>
> >>>>     I'm going to type a couple of related thoughts that came to
> >>>>     mind when I read your response, just to get them out there for
> >>>>     everyone, while I have a few more minutes.
> >>>>
> >>>>     We discussed the maturity of our projects a bit during the
> >>>>     committee meeting. One of the interesting things about our
> >>>>     projects in Science (ICE, DAWNSci, Chemclipse) is that even
> >>>>     though they are currently incubating they are pretty large,
> >>>>     established and mature from our pre-Eclipse days. The trip
> >>>>     through incubation for these projects is more about compliance
> >>>>     with IP and PMC needs than development of code, although that
> >>>>     is still happening. I think it is safe to say that we what we
> >>>>     are really incubating with this three projects is the neither
> >>>>     the technology nor the governance, but the IP trail and
> >>>>     membership in the project community, or at least it seems so to
> >>>>     me. It looks like the same may be true for some possible future
> >>>>     projects as well, although the viz project would be close to a
> >>>>     completely new effort.
> >>>>
> >>>>     Another thing we discussed is that science projects typically
> >>>>     have strong relationships with the government of the country
> >>>>     where they were written. This presents a whole different set of
> >>>>     issues than, say, pure technology projects. Help with dealing
> >>>>     with these issues could be one really great benefit of a
> >>>>     Science PMC.
> >>>>
> >>>>     Jay
> >>>>
> >>>>
> >>>>     On Tue, Apr 7, 2015 at 3:35 PM, Mike Milinkovich
> >>>>     <mike.milinkovich@xxxxxxxxxxx
> >>>>     <mailto:mike.milinkovich@xxxxxxxxxxx>> wrote:
> >>>>
> >>>>         On 07/04/2015 3:25 PM, Jay Jay Billings wrote:
> >>>>
> >>>>             We decided that probably the best time to propose the
> >>>>             top level project is when we have four or five active
> >>>>             projects, so we are not quite there yet. We expect that
> >>>>             we won't be far off by the end of Q2 2015. There are
> >>>>             many other issues than simply "project count" related
> >>>>             to this though and those are the things that we should
> >>>>             start discussing.
> >>>>
> >>>>             So, any thoughts?
> >>>>
> >>>>
> >>>>         FWIW, I would recommend thinking about a different
> >>>>         criteria. Namely, that you think about project maturity
> >>>>         rather than the sheer number of projects. In our
> >>>>         experience, starting a PMC where none of the participants
> >>>>         have gone through the full project release process does not
> >>>>         work all that well. So instead of "four or five active
> >>>>         projects", maybe think about "two or three mature projects".
> >>>>
> >>>>         Just my $0.02 worth...
> >>>>
> >>>>         --
> >>>>         Mike Milinkovich
> >>>>         mike.milinkovich@xxxxxxxxxxx
> >>>>         <mailto:mike.milinkovich@xxxxxxxxxxx>
> >>>>         +1.613.220.3223 <tel:%2B1.613.220.3223> (mobile)
> >>>>
> >>>>         _______________________________________________
> >>>>         science-iwg mailing list
> >>>>         science-iwg@xxxxxxxxxxx <mailto:science-iwg@xxxxxxxxxxx>
> >>>>         To change your delivery options, retrieve your password, or
> >>>>         unsubscribe from this list, visit
> >>>>         https://dev.eclipse.org/mailman/listinfo/science-iwg
> >>>>
> >>>>
> >>>>
> >>>>
> >>>>     --
> >>>>     Jay Jay Billings
> >>>>     Oak Ridge National Laboratory
> >>>>     Twitter Handle: @jayjaybillings
> >>>>
> >>>>
> >>>>     _______________________________________________
> >>>>     science-iwg mailing list
> >>>>     science-iwg@xxxxxxxxxxx  <mailto:science-iwg@xxxxxxxxxxx>
> >>>>     To change your delivery options, retrieve your password, or
> unsubscribe from this list, visit
> >>>>     https://dev.eclipse.org/mailman/listinfo/science-iwg
> >>>
> >>>
> >>>     --
> >>>     ~~~~~~~~~~~~~~~~~~~~~~~~
> >>>     Dr. Philip Wenig
> >>>
> >>>     http://www.openchrom.net  <http://www.openchrom.net/>
> >>>
> >>>     https://www.xing.com/profile/Philip_Wenig
> >>>     http://de.linkedin.com/pub/philip-wenig/2a/4a8/877
> >>>     ~~~~~~~~~~~~~~~~~~~~~~~~
> >>>     _______________________________________________
> >>>     science-iwg mailing list
> >>>     science-iwg@xxxxxxxxxxx <mailto:science-iwg@xxxxxxxxxxx>
> >>>     To change your delivery options, retrieve your password, or
> >>>     unsubscribe from this list, visit
> >>>     https://dev.eclipse.org/mailman/listinfo/science-iwg
> >>
> >>
> >>
> >>     _______________________________________________
> >>     science-iwg mailing list
> >>     science-iwg@xxxxxxxxxxx  <mailto:science-iwg@xxxxxxxxxxx>
> >>     To change your delivery options, retrieve your password, or
> unsubscribe from this list, visit
> >>     https://dev.eclipse.org/mailman/listinfo/science-iwg
> >
> >     --
> >
> >     Ian Skerrett
> >     VP of Marketing
> >     Eclipse Foundation
> >     (m)613-240-7210  <tel:613-240-7210>
> >     (o)613-224-9461 ext 227  <tel:613-224-9461%20ext%20227>
> >     (t) @ianskerrett
> >
> >
> >     _______________________________________________
> >     science-iwg mailing list
> >     science-iwg@xxxxxxxxxxx <mailto:science-iwg@xxxxxxxxxxx>
> >     To change your delivery options, retrieve your password, or
> >     unsubscribe from this list, visit
> >     https://dev.eclipse.org/mailman/listinfo/science-iwg
> >
> >
> >
> >
> > --
> > Jay Jay Billings
> > Oak Ridge National Laboratory
> > Twitter Handle: @jayjaybillings
> >
> >
> > _______________________________________________
> > science-iwg mailing list
> > science-iwg@xxxxxxxxxxx
> > To change your delivery options, retrieve your password, or unsubscribe
> from this list, visit
> > https://dev.eclipse.org/mailman/listinfo/science-iwg
>
> --
>
> Ian Skerrett
> VP of Marketing
> Eclipse Foundation
> (m) 613-240-7210
> (o) 613-224-9461 ext 227
> (t) @ianskerrett
>
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