Re: [science-iwg] Eclipse RCP and R-Integration

[Valentin Georgiev <valentin.georgiev@xxxxxxxxxxxxx>]

Hi Philip,

Marcel has already posted an excellent overview with examples.

I should probably add a reference to http://www.walware.de - this project includes StatET - an Eclipse IDE for R, and RJ - an OS library/framework for integration of R in Java applications. In Bioclipse-R we basically use some of the RJ modules to achieve the desired functionality.

Best,

Valentin

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Valentin Georgiev

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On Mar 2, 2013, at 9:44 AM, Ola Spjuth wrote:

Hi:

Copying in Valentin who better can answer about the R-integration. It has not been trivial to support different platforms and versions.

Cheers,

Ola

On 1 mar 2013, at 23:17, Philip Wenig <philip.wenig@xxxxxxxxxxxxxx> wrote:

Hi folks,

Bio7 and Bioclipse have shown successfully, that an integration of R is feasible. Are there any documents available how to run R-scripts from/within Java code? Marcel or Ola, do you have time to give a short technical explanation, how you've integrated R in your RCP's?

Is anyone aware of a good way to integrate/run Matlab scripts from/within Java code?

Cheers,

Philip

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Dr. Philip Wenig

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Valentin Georgiev, PhD

Pharmaceutical Bioinformatics

BMC, Uppsala University