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Create a logic diagram that is taller than it is wider. Zoom to a level such that the entire diagram fits on the screen (no scrollbars). Select Fit to Width from the drop-down. You'll see that both the horizontal and vertical scrollbars appear at this new zoom level. It seems "fit to" options are not taking into account the possibility of scrollbars showing up.
Apparently, this is a known problem and the javadoc warns about such minor discrepancies. If the zoom manager is provided with the scrollbar trim then it could account for that. Not for 3.1.