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My project works well in 20011107. I tried to upgrade to 20011219/18, after the eclipse startup. It showes "The project was not built since it is inconsistent, refresh this project and rebuild it". And I tried to refresh from local. After a while, it started to invoke build and then failed. The reason is the same. I removed some src directories and it works. It seems there is limitation for size of the project.
There are no size limitations for projects, but it is possible that the first refresh did not do the job. This error occurs usually because a subdirectory of the output directory could not be deleted since its the current directory of a dos box/explorer. Was there an open explorer on the output directory?
I guess I found the reason: If there exists resource files (e.g. a.xml) with same name in different source folder (in the same package/folder), it complains. Attached is the simplified project for you ref.
Created attachment 207 [details] simple project showing the bug
*** This bug has been marked as a duplicate of 7324 ***