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A ConnectionRouter and/or a layout manager, which makes connections go (right- angled) around editparts would be very important in my opinion. Diagrams, in which connections and editors overlap themselves, are not very user friendly. I haven't found a possibility to do that.
There is an algorithm for doing this without right-angled connections. See the logic example for a demo. *** This bug has been marked as a duplicate of 71498 ***