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As part of Bug 496532 a new interface has been added so that adopters could override the refresh. It as been done in a specific interface to avoid breaking existing clients but it should be merged with IRefreshExtension in the next release which might have API changes.
New Gerrit change created: https://git.eclipse.org/r/90747
Gerrit change https://git.eclipse.org/r/90747 was merged to [master]. Commit: http://git.eclipse.org/c/sirius/org.eclipse.sirius.git/commit/?id=4bdc7ed264e50b0675d5e4d8262fcd32b803e08f
Fixed by 4bdc7ed264e50b0675d5e4d8262fcd32b803e08f.
Verified on the code itself (also checked the releases notes mention the change).
Available in Sirius 5.0.0, see https://wiki.eclipse.org/Sirius/5.0.0 for details.