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Currently the new index can only read .jar or .class files. We should also add support for indexing .java files. This will handle the case where the autobuilder is disabled. In the case where the autobuilder is enabled, it probably makes sense to delay indexing (of .java files) until after the build completes and then index the derived .class files rather than the original .java files. This should speed up indexing considerably. In the case where the autobuilder is disabled, we should index the .java files directly. In both cases, the NdResourceFile should point to the ".java" file as the source of truth for its fingerprint tests.
The implementation of the old indexer can be found in SourceElementParser and SourceIndexerRequestor.
Still an issue. Need to follow up.
bulk move out of 4.8