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In some cases, the output location of a Maven project cannot be found through the workspace API and an NPE is thrown in JavaPackageFragmentRootHandler due to: IPath location = ResourcesPlugin.getWorkspace().getRoot() .findMember(outputLocation).getLocation(); This may be related to Maven projects going out of synch with filesystem: https://bugs.eclipse.org/bugs/show_bug.cgi?id=495814