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Color highlighting of task tags (TODO etc.) in JDT editors does not take into account project-level settings for tags, i.e. colorizing always uses global preferences (Preferences->Java->Task Tags), even if project properties (Properties->Java Task Tags) override these settings. Note, that task marker/task list generation works properly, so this is purely UI problem.
Removed bug 39478 as being blocked by this PR. The Java editor will read the project options via IJavaProject.getOptions. There's no general platform mechanism to get the project specific options. Note: This might change when the new Settings API will be released (planned for 3.0).
Also a problem in 3.0.
Sure. That's why it is still open.
Solution is underway but would have been too intrusive to release shortly before M7. Postponed.
Released Christof's patches. Available in builds > 20040225