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MWE has a wrapper for the WorkflowRunner as Eclipse IApplication implementation org.eclipse.emf.mwe.core.WorkflowRunnerApplication, which enabled execution of MWE workflows as headless application. This is necessary for standalone execution of workflows, where components require the workspace or any other Eclipse facilities. Concrete use case is for example generating code from AUTOSAR models with ARTOP. Since MWE2 has its own standalone runner this application wrapper is also required for the org.eclipse.emf.mwe2.runtime plugin. This should be rather copy/paste the other class and add the appropriate plugin.xml entry to the org.eclipse.emf.mwe2.runtime plugin.
Failing an OSGi mode, the support in https://bugs.eclipse.org/bugs/show_bug.cgi?id=271253 would reuse the registry processing code in stand alone mode.