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fn:substring can accept both negative and postive values for starting position and ending position. The current code is not taking into account the adjustments that are needed in positioning.
Created attachment 143154 [details] Fix for Substring failures This fixes the substring failures and also refactors the code for easier readability. The main substring function was doing too much stuff.
Created attachment 143155 [details] mylyn/context/zip
patch checked into head, and tests pass.