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1. Create ClassD. Create Classes A, B. Create an AssociationClass C. Create Association Ends from AssociationClass C to classes A and B. Call 'Synchronize...' action. In the tree un-check second node for the association class. Press 'OK'. Class rectangle of an AssociationClass and connector between rhomb and rectangle disappeared. That's correct. Call 'Synchronize...' action again. In the tree check recently deselected node of the association class. Press 'OK'. Class rectangle will appear, but a connector will not. Refreshing the diagram using F5 or re-opening the diagram doesn't make the missing connector to appear.
2. Deleting rhomb: Create ClassD. Create Classes A, B. Create an AssociationClass C. Create Association Ends from AssociationClass C to classes A and B. Call 'Synchronize...' action. In the tree un-check node for the rhomb of association class. Press 'OK'. Rhomb of an AssociationClass, connector between rhomb and rectangle and Association links disappeared. But class rectangle is still shown. That's a bit strange, but OK. Call 'Synchronize...' action again. In the tree check recently deselected node of the association class. Press 'OK'. Rhomb will appear, but neiner connector nor Association Ends will not. Refreshing the diagram using F5 or re-opening the diagram doesn't make the missing links to appear.
Batch Update: UML2Tools is sample component for GMF-Tooling after restructuring