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There is a possible dead lock condition that has been hit by an adopter because the inner class GraphUpdateJob in DependencyGraphImple has a null rule, the rule should be to lock on the workspace.
Created attachment 105958 [details] Patch patch adds rule to lock on workspace. Has been ad hock tested with basic project creation along with running the entire Java EE tools headliss test suite.
*** Bug 238684 has been marked as a duplicate of this bug. ***
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Committed to R3_0_maintenance