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The refresh connection manager on the shape compartment editpart determines whether a connection, one of the ends of which is inside the shape compartment, needs to be clipped or not. Connection is clipped if its source and/or target anchor point is clipped. Therefore connection refresh manager needs to know the anchor points coordinates for a connection. Problem. Anchor points are calculated manually, although the connection has been laid out already and anchor points could be just read directly from the connection without any calculations. Clipped or not visible connections need to be routed, however, to determine whether they still need to be clipped. This issue leads to showing connections that need really be clipped and vice versa.
Another problem is that connection one of the ends of which is contained within a collapsed shape compartment needs to be hidden.
Fix committed for 2.1 M5 and 2.0.2
[GMF Restructure] Bug 319140 : product GMF and component Runtime Diagram was the original product and component for this bug