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The fix for bug 196866 overlooked one case. Currently the user can manually give two local attributes or two global elements the same name by using the source page. As a fix for this I would recommend auto generating a new name during the model creation similarly to the discussions in bug 196866 comment 2 and bug 196685.
We should be able to provide some validation to notify the user when this happens. We already have schema validation, we just need to add this functionality.
Adding context.
Created attachment 84156 [details] mylyn/context/zip
Created attachment 84528 [details] org.eclipse.pde.core.patch Flags duplicate elements as errors. I also extracted some text into constants.
Created attachment 84529 [details] mylyn/context/zip
Fixed in HEAD. Thanks for the bug report Adam.
verified on I20071211-0010.