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It would be great to have support both for handling .sqlj files in the interface (code formatting, syntax highlighting, etc.), as well as being able to pre-process these .sqlj files into .java files via the appropriate translators, reporting errors/warnings to the Tasks window, and then continuing with a the build as normal. I'm sure this has been entered before, but I was unable to find any prior requests.
This isn't part of the Java Tooling, rather the job of a client of JDT, like JSP support...
Won't fix