I have OpenMPI installed in my home directory inside of a PETSc build. I'm able to build the example project "MyMPIProject" that can be found in the Help section within Eclipse, but I'm having problems running it in eclipse PTP.
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Sorry! You were supposed to get help about:
opal_init:startup:internal-failure
But I couldn't open the help file:
/usr/local/share/openmpi/help-opal-runtime.txt: No such file or directory. Sorry!
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*** An error occurred in MPI_Init
*** on a NULL communicator
*** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort,
*** and potentially your MPI job)
[miguel-Precision-WorkStation-T3500:10027] Local abort before MPI_INIT completed successfully; not able to aggregate error messages, and not able to guarantee that all other processes were killed!
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Sorry! You were supposed to get help about:
orte_init:startup:internal-failure
But I couldn't open the help file:
/usr/local/share/openmpi/help-orte-runtime: No such file or directory. Sorry!
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Sorry! You were supposed to get help about:
mpi_init:startup:internal-failure
But I couldn't open the help file:
/usr/local/share/openmpi/help-mpi-runtime: No such file or directory. Sorry!
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mpirun noticed that the job aborted, but has no info as to the process
that caused that situation.
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#PTP job_id=10026
No problems if I run it from the shell. I have tried to specify all the possible variables and directories:
- In Window > Preferences > Parallel Tools > Parallel Language > MPI, I included all the headers that are in my OpenMPI installation, also the MPI build commands for C and C++
- I included the PATH variable in the Environment tab at the Running configuration with the directory where the help files above mentioned (help-mpi-runtime, help-orte-runtime, etc) are.
PATH = /home/miguel/petsc-3.4.4/arch-linux2-c-debug/bin:/usr/local/bin:/usr/bin:/home/miguel/petsc-3.4.4/arch-linux2-c-debug/share/openmpi
