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Re: [ptp-user] Debug on a SLURM cluster through PBS resource manager
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Thanks for you reply. I made some progress: I can launch a job with the SLURM resource manager. I see my job in the jobs list :-))
But the cluster which I currently use has a scratch space implemented as one disk per node, no real parallel FS layer. So I need to copy my data on each node disk and move them back at the end. I usually do this pre and post process in my submission script (like srun cp $HOME:data node:/scratch/)...
-my question: how can I set up the resource manager to use my submission script?
-and/or my second question: how can I change some properties like job name, std output file name... ? Because I do not see any output... Thanks to the JAXB stuff?
Best regards,
Stephane
On 19 oct. 2011, at 15:38, Greg Watson wrote:
>
> On Oct 19, 2011, at 3:21 AM, Stéphane Backaert wrote:
>
>> Hello,
>>
>> I have access to a cluster via ssh. This cluster uses the SLURM job manager. I can connect both a SLURM resource manager or a PBS-Generic-Batch rm.
>> The former shows me the icons relative to the nodes in the "Machines" view but the submitted jobs via this interface seem to be launch on the frontend and complain about missing libs. Is SLURM rm an interactive launcher?
>> The latter does not show me any information about the cluster (nothing in Machines or Jobs List views) but the jobs start correctly (SLURM understands PBS keyword in the submission script?).
>
> SLURM is not interactive as far as I know. It may be an issue with the version of SLURM you have installed. Jie, can you help?
>
>>
>> My problem: when I try to launch a parallel debug job with the PBS-Generic-Batch rm, it complains with the message "Configuration is missing run commands for job submission 778c1a5f-d3db-41ce-8be3-f3736e47b7a1 debug". Any clue?
>
>
> Do you have PBS installed on the cluster also? I don't believe SLURM is supported by the new resource manager framework yet.
>
> Regards,
> Greg
>
>>
>
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