Re: [ptp-user] SDM breakpoints problems - with Photran/Fortran

[Greg Watson <g.watson@xxxxxxxxxxxx>]

Li Hang,

Yes, it's possible this a problem with the combination of ifort and gdb. I would suggest two options:

1. Try installing a later version of gdb. You're using 7.0, but the current version is 7.2. It's possible this may fix the problem.

2. Try compiling with gfortran rather than ifort as gfortran should be more compatible with gdb.

Regards,

Greg

On Jun 29, 2011, at 8:00 AM, lihang wrote:

This program is built by ifort. Does it conflict with gdb ?

 

Thanks.

Li Hang

 

 

Hi,

 

I have encountered a problem when trying to debug an FORTRAN program POP(Parallel Ocean

Program which brought massively parallel computers to the realm of climate modeling) in

eclipse 3.6.2 with newest PTP version. The program is built by ifort 10.1 and submitted by

slurm 2.1.15. The debugging can start normally when begins without setting breakpoints, but

if I set one or some breakpoints at main() or somewhere, it will exit after launching debug. The

errors display from console but not eclipse, and the program threads abort and exit.

 

Here is the error output:

Fatal error in PMPI_Init_thread: Other MPI error, error stack:

MPIR_Init_thread(388)...........:

MPID_Init(121)..................:

MPIDI_Populate_vc_node_ids(1188):

MPID_Get_max_node_id(794).......: PMI_Barrier returned 14

Fatal error in PMPI_Init_thread: Other MPI error, error stack:

MPIR_Init_thread(388)...........:

MPID_Init(121)..................:

MPIDI_Populate_vc_node_ids(1188):

MPID_Get_max_node_id(794).......: PMI_Barrier returned 14

Fatal error in PMPI_Init_thread: Other MPI error, error stack:

MPIR_Init_thread(388)...........:

MPID_Init(121)..................:

MPIDI_Populate_vc_node_ids(1188):

MPID_Get_max_node_id(794).......: PMI_Barrier returned 14

Fatal error in PMPI_Init_thread: Other MPI error, error stack:

MPIR_Init_thread(388)...........:

MPID_Init(121)..................:

MPIDI_Populate_vc_node_ids(1188):

MPID_Get_max_node_id(794).......: PMI_Barrier returned 14

 

This program works when submitted through slurm command line.

Where are these errors from? And how can I start my debug?

Can I know the usage of sdm command line?

Thanks,

Li Hang

 

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