Al
----- Wyatt Spear <
wspear@xxxxxxxxxxxxxx> wrote:
> This is what was available in the RM list provided by the packages in the
> HEAD psf file. Is there a different RM project I should download that has a
> more recent PBS RM?
>
> Thanks,
> Wyatt
>
> On Mon, Jun 20, 2011 at 4:08 PM, Albert L. Rossi <
arossi@xxxxxxxxxxxxx>wrote:
>
> > Wyatt,
> >
> > by legacy, I assume you mean 4.0 (Helios).
> >
> > I imagine this is some proxy issue (like maybe not parsing the submit lines
> > and being able to send a JobStatusChanged event -- I think that's the old
> > protocol).
> >
> > Is there some reason why you need to use 4.0? It has been deprecated and I
> > don't believe we are going to put any further effort into bug fixes for it
> > ...
> >
> > Cheers,
> >
> > Al
> > ----- Wyatt Spear <
wspear@xxxxxxxxxxxxxx> wrote:
> > > Greetings,
> > >
> > > I'm trying to launch a job using the PBS Legacy Resource Manager. It
> > > detects the relevant nodes and the script it generates works correctly
> > when
> > > turned into a file and submitted with qsub on the command line. However
> > > when I attempt to run the job in Eclipse it hangs and has to be canceled.
> > >
> > >
> > > The progress view has two tasks when it stops advancing
> > >
> > > "Remote Tools DStore Server (mist)" has its progress bar full and says
> > > "Server running, cancel to terminate".
> > >
> > > The next task
> > > "Launching ReallyRemoteC"
> > > has its progress bar about 4/5 full and is stuck on the status
> > "Initializing
> > > remote services: Remote Tools: Submitting the job"
> > >
> > > I don't think it's a network problem because I can launch jobs using the
> > > OpenMPI resource manager over the same Remote Tools connection. The
> > console
> > > output is pasted below.
> > >
> > > Thanks,
> > > Wyatt Spear
> > >
> > >
> > > !ENTRY org.eclipse.ptp.remote.core 4 0 2011-06-20 15:14:19.112
> > > !MESSAGE Remote Tools DStore Server: Server running on:
> >
mist.cs.uoregon.edu
> > > [NewRemoteC, /mnt/netapp/home1/wspear/RemoteWorkspace/ReallyRemoteC, [],
> > > true,
> > >
> > #!/bin/bash\n\n#####################################################################\n##\sTemplate\sfor\sPBS\sBatch\sScript\sGenerated\sby\sPBS\sResource\sManager\n##\s\n##\sThis\stemplate\scontains\sall\sthe\sJob\sAttributes\srecognized\sas\svalid\n##\sby\sa\sgiven\sPBS\sproxy\sinstance.\n##\s\n##\sPlaceholders\s(@NAME@
> > >
> > )\sare\sincluded\sfor\sthe\sPBS\sJob\sAttribute\s\n##\snames\sas\sspecified\sby\sqsub,\splus\sthe\sfollowing\sinternal\svariables:\n##\n##\s-\senv\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s:\splace\sfor\sdefining\sextra\senvironment\n##\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\svariables\s(NB:\sshould\snot\sbe\sremoved)\n##\s-\sprependedBash\s\s\s\s\s\s\s\s\s\s\s:\sdynamically\schange\sarbitrary\sbash\s\n##\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\scommands\swhich\sshould\sprecede\sthe\s\n##\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\sexecution\sof\sthe\smain\sapplication\scode\n##\s-\smpiCommand\smpiOptions\s\s\s:\srun\sunder\sMPI\n##\s-\sexecutablePath\sprogArgs\s:\sthe\sactual\sapplication\n##\s-\spostpendedBash\s\s\s\s\s\s\s\s\s\s:\sdynamically\schange\sarbitrary\sbash\s\n##\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\scommands\swhich\sshould\sfollow\sthe\s\n##\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s\s!
\s\
> >
> > sexecution\sof\sthe\smain\sapplication\scode\n##\n##\sA\stemplate\scan\salso\sdirectly\scontain\sarbitrary\sshell\sscripting\s(not\s\n##\sto\sbe\sreplaced\svia\sthe\s'prepended'\sand\s'postpended'\splaceholders);\n##\sthese\slines\swill\sremain\sfixed\sand\swill\snot\sbe\sexposed\sthrough\n##\sthe\sLaunch\sTab\sfor\smodification\s(they\scan\showever\sbe\saltered\sby\s\n##\susing\sthe\sResource\sManager\sProperties\s"Edit"\sTab).\n##\n##\sNOTE:\sWe\sadvise\sremoving\seither\sthe\sncpus\sor\sthe\snodes\sresource,\n##\s\s\s\s\s\s\sdepending\son\sthe\sPBS\sconfiguration\s(nodes\sis\smore\scommon);\n##\s\s\s\s\s\s\sotherwise,\sthe\scorrect\svalue\smust\sbe\sset\son\sboth\sredundantly\n##\s\s\s\s\s\s\sin\sorder\sfor\sthe\sMPI\scomputation\sto\sbe\scorrect\s(and\s\n##\s\s\s\s\s\s\ssome\ssystems\smight\sreject\sa\sscript\swith\sboth\sset).\n#####################################################################\n#PBS\s-q\smist\n#PBS\s-N\sETest\n#PBS\s-l\sncpus=8\n#PBS\s-l\snodes=!
1:ppn
> >
> > =8\n#PBS\s-l\swalltime=00:30:00\n#PBS\s-V\s\n\ncd\s/mnt/netapp/home1/wspear/RemoteWorkspace/ReallyRemoteC\nmpiexec\s-n\s8\s/mnt/netapp/home1/wspear/RemoteWorkspace/ReallyRemoteC/NewRemoteC\s\n\n]
> > >
> > > !ENTRY org.eclipse.ptp.remote.core 4 0 2011-06-20 15:33:02.048
> > > !MESSAGE Remote Tools DStore Server: DStore Server Starting...
> > >
> > > !ENTRY org.eclipse.ptp.remote.core 4 0 2011-06-20 15:33:02.252
> > > !MESSAGE Remote Tools DStore Server: Server Started Successfully
> > >
> > > !ENTRY org.eclipse.ptp.remote.core 4 0 2011-06-20 15:33:02.252
> > > !MESSAGE Remote Tools DStore Server: 43871
> > >
> > > !ENTRY org.eclipse.ptp.remote.core 4 0 2011-06-20 15:33:02.498
> > > !MESSAGE Remote Tools DStore Server: Server running on:
> >
mist.cs.uoregon.edu
> >
> > _______________________________________________
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> >
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> >
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> >
> >
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