Re: [ptp-user] slurm rm proxy compilation problems

[Greg Watson <g.watson@xxxxxxxxxxxx>]

Hi Ola,

It looks like there may be a problem with the version of SLURM you're using. I'll have to let the developers of the SLURM resource manager answer this one. 

Jie, any ideas?

Thanks,

Greg

On Feb 3, 2010, at 5:57 PM, Ola Spjuth wrote:

Hi,

I tried setting up the slurm remote proxy server "org.eclipse.ptp.rm.slurm.proxy_3.0.1.201002011019" but it failed during "make" with the following error:

[olas@kalkyl1 org.eclipse.ptp.rm.slurm.proxy_3.0.1.201002011019]$ make

make  all-am

make[1]: Entering directory `/bubo/home/h12/olas/eclipse/org.eclipse.ptp.rm.slurm.proxy_3.0.1.201002011019'

if gcc -DHAVE_CONFIG_H -I. -I. -I.   -I/etc/slurm/include  -g -O2 -Wall -I../org.eclipse.ptp.utils_3.0.1.201002011019/include -I../org.eclipse.ptp.proxy_3.0.1.201002011019/include -I/etc/slurm/include -MT ptp_slurm_proxy-ptp_slurm_proxy.o -MD -MP -MF ".deps/ptp_slurm_proxy-ptp_slurm_proxy.Tpo" -c -o ptp_slurm_proxy-ptp_slurm_proxy.o `test -f 'src/ptp_slurm_proxy.c' || echo './'`src/ptp_slurm_proxy.c; \

then mv -f ".deps/ptp_slurm_proxy-ptp_slurm_proxy.Tpo" ".deps/ptp_slurm_proxy-ptp_slurm_proxy.Po"; else rm -f ".deps/ptp_slurm_proxy-ptp_slurm_proxy.Tpo"; exit 1; fi

In file included from src/ptp_slurm_proxy.c:62:

src/srun_opt.h:117: error: ‘SYSTEM_DIMENSIONS’ undeclared here (not in a function)

src/ptp_slurm_proxy.c: In function ‘init_logfp’:

src/ptp_slurm_proxy.c:346: warning: unused variable ‘pw’

src/ptp_slurm_proxy.c: In function ‘write_routing_file’:

src/ptp_slurm_proxy.c:497: warning: cast to pointer from integer of different size

src/ptp_slurm_proxy.c:498: warning: cast to pointer from integer of different size

src/ptp_slurm_proxy.c: In function ‘create_job_desc_msg_from_opts’:

src/ptp_slurm_proxy.c:1854: error: ‘job_desc_msg_t’ has no member named ‘max_sockets’

src/ptp_slurm_proxy.c:1856: error: ‘job_desc_msg_t’ has no member named ‘max_cores’

src/ptp_slurm_proxy.c:1858: error: ‘job_desc_msg_t’ has no member named ‘max_threads’

src/ptp_slurm_proxy.c:1860: error: ‘job_desc_msg_t’ has no member named ‘job_min_procs’

src/ptp_slurm_proxy.c:1862: error: ‘job_desc_msg_t’ has no member named ‘job_min_sockets’

src/ptp_slurm_proxy.c:1864: error: ‘job_desc_msg_t’ has no member named ‘job_min_cores’

src/ptp_slurm_proxy.c:1866: error: ‘job_desc_msg_t’ has no member named ‘job_min_threads’

make[1]: *** [ptp_slurm_proxy-ptp_slurm_proxy.o] Error 1

make[1]: Leaving directory `/bubo/home/h12/olas/eclipse/org.eclipse.ptp.rm.slurm.proxy_3.0.1.201002011019'

make: *** [all] Error 2

Is this error due to the fact that the remote system I am trying to access is running slurm 2.1.0, or have I done something incorrectly? If due to version, what are the plans to upgrade the slurm rm proxy to support version 2.1?

Cheers,

/Ola

--

Ola Spjuth, PhD

Department of Pharmaceutical Biosciences

Box 541, Uppsala University

Sweden

Email: ola.spjuth@xxxxxxxxxxxxx

Web: http://www.farmbio.uu.se

Bioclipse: http://www.bioclipse.net

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