Re: [ptp-user] PTP under Mac OS X with OpenMPI 1.3

[Beth Tibbitts <tibbitts@xxxxxxxxxx>]

Thom,
I had a similar problem when I did not uninstall OpenMPI version 1.2.* before installing OpenMPI 1.3


...Beth

Beth Tibbitts (859) 243-4981 (TL 545-4981)
Eclipse Parallel Tools Platform http://eclipse.org/ptp
Mailing Address: IBM Corp., Coldstream Research Campus, 745 West New Circle Road, Lexington, KY 40511

Thomas Büsser ---03/30/2009 12:29:50 PM---[buesser-2.local:07649] Warning: could not find environment variable "-

Thomas Büsser <thomas@xxxxxxxxxx>
Sent by: ptp-user-bounces@xxxxxxxxxxx

03/30/2009 12:29 PM

Please respond to
PTP User list <ptp-user@xxxxxxxxxxx>

To	PTP User list <ptp-user@xxxxxxxxxxx>
cc
Subject	Re: [ptp-user] PTP under Mac OS X with OpenMPI 1.3

[buesser-2.local:07649] Warning: could not find environment variable "- 
display-map"
--------------------------------------------------------------------------
Failed to find the following executable:

Host:       buesser-2.local
Executable: -m

Cannot continue.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
Failed to find the following executable:

Host:       buesser-2.local
Executable: -m

Cannot continue.
--------------------------------------------------------------------------

i also saw that mpirun has version 1.2.3 (why the hell, i installed  
OpenMPI 1.3). So i switched the Resource Manager to 1.2 and get an

An internal error occurred during: "Open Mpi Job".
java.util.NoSuchElementException

perhaps i have to update mpirun to version 1.3

Am 30.03.2009 um 17:09 schrieb Greg Watson:

> Please run the following command from the command line and let me  
> know what output you get:
>
> mpirun -mca orte_show_resolved_nodenames 1 -xml -display-map -np 4  
> MPIProject 20
>
> Thanks,
>
> Greg
>
> On Mar 30, 2009, at 10:16 AM, Thomas Büsser wrote:
>
>> Hi Greg
>>
>> PTP Version is 2.1.1.200903061902, i have also installed the  
>> OpenMPI-Support-PlugIn.
>> A simple program from the command line (mpirun -c 4 MPIProject 20)  
>> runs with no problems. also the version of Open MPI matches with  
>> the one used in the resource manager (1.3 running on localhost)
>>
>> Thomas
>>
>> Am 30.03.2009 um 16:04 schrieb Greg Watson:
>>
>>> Hi Thomas,
>>>
>>> What version of PTP do you have installed?
>>>
>>> Also, please check that you can run a simple mpi program from the  
>>> command line.
>>>
>>> Finally, check that the version of Open MPI that you have  
>>> installed matches the version in the resource manager.
>>>
>>> Thanks,
>>>
>>> Greg
>>>
>>>
>>> On Mar 29, 2009, at 10:29 AM, Thomas Büsser wrote:
>>>
>>>> Hi,
>>>>
>>>> i tried to use the ptp with openmpi under mac os x 10.5 (openmpi  
>>>> was installed via fink). i followed the instructions from the ptp- 
>>>> wiki to setup the eclipse-enviromenty. but when i try to launch  
>>>> an simple "hello-world" mpi-application in the ptp runtime i get  
>>>> the following error-message:
>>>>
>>>>
>>>> Failed after executing command to launch parallel application.
>>>> Failed to parse output of Open MPI command. Check output for  
>>>> errors.
>>>> Premature end of file.
>>>>
>>>>
>>>>
>>>> org.eclipse.core.runtime.CoreException: Failed to parse output of  
>>>> Open MPI command. Check output for errors.
>>>> 		 at  
>>>> org 
>>>> .eclipse 
>>>> .ptp 
>>>> .rm 
>>>> .mpi 
>>>> .openmpi.core.OpenMPIPlugin.coreErrorException(OpenMPIPlugin.java: 
>>>> 89)
>>>> 		 at  
>>>> org 
>>>> .eclipse 
>>>> .ptp 
>>>> .rm 
>>>> .mpi 
>>>> .openmpi 
>>>> .core 
>>>> .rtsystem 
>>>> .OpenMPIRuntimeSystemJob 
>>>> .doExecutionStarted(OpenMPIRuntimeSystemJob.java:326)
>>>> 		 at  
>>>> org 
>>>> .eclipse 
>>>> .ptp 
>>>> .rm 
>>>> .core 
>>>> .rtsystem 
>>>> .AbstractToolRuntimeSystemJob 
>>>> .run(AbstractToolRuntimeSystemJob.java:207)
>>>> 		 at org.eclipse.core.internal.jobs.Worker.run(Worker.java:55)
>>>> Caused by: java.io.IOException: Premature end of file.
>>>> 		 at  
>>>> org 
>>>> .eclipse 
>>>> .ptp 
>>>> .rm 
>>>> .mpi 
>>>> .openmpi 
>>>> .core 
>>>> .rtsystem 
>>>> .OpenMPIProcessMapXml13Parser 
>>>> .parse(OpenMPIProcessMapXml13Parser.java:550)
>>>> 		 at  
>>>> org 
>>>> .eclipse.ptp.rm.mpi.openmpi.core.rtsystem.OpenMPIRuntimeSystemJob 
>>>> $3.run(OpenMPIRuntimeSystemJob.java:216)
>>>>
>>>> can someone tell me what's going wrong here, i have no clue...
>>>>
>>>> Thanks a lot
>>>>
>>>> regards
>>>> Thomas
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>>>
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