### Eclipse Workspace Patch 1.0
#P org.eclipse.jdt.core.tests.model
Index: src/org/eclipse/jdt/core/tests/model/ClasspathInitializerTests.java
===================================================================
RCS file: /cvsroot/eclipse/org.eclipse.jdt.core.tests.model/src/org/eclipse/jdt/core/tests/model/ClasspathInitializerTests.java,v
retrieving revision 1.43
diff -u -r1.43 ClasspathInitializerTests.java
--- src/org/eclipse/jdt/core/tests/model/ClasspathInitializerTests.java	19 Jan 2007 17:10:23 -0000	1.43
+++ src/org/eclipse/jdt/core/tests/model/ClasspathInitializerTests.java	31 Jan 2007 18:23:57 -0000
@@ -1198,6 +1198,46 @@
 }
 
 /**
+ * @bug 172207: [model] Marker for deprecated classpath variable should always have WARNING severity
+ * @see "https://bugs.eclipse.org/bugs/show_bug.cgi?id=172207"
+ */
+public void testVariableInitializerBug172207() throws CoreException {
+	try {
+		// Create initializer
+		String varName = "TEST_DEPRECATED_READ_ONLY";
+		String path = "/P1/lib.jar";
+		VariablesInitializer.setInitializer(new DefaultVariableInitializer(new String[] { varName, path }));
+		assertEquals("JavaCore classpath value should have been initialized", JavaCore.getClasspathVariable(varName).toString(), path);
+
+		// verify that Classpath Variable is read-only
+		assertEquals("JavaCore classpath variable should be deprecated", "A deprecated and read-only initializer", JavaCore.getClasspathVariableDeprecationMessage(varName));
+		assertTrue("JavaCore classpath variable should be read-only", JavaCore.isClasspathVariableReadOnly(varName));
+
+		// Create project
+		IJavaProject project = createJavaProject("P1");
+		createFile("/P1/lib.jar", "");
+		IClasspathEntry variable = JavaCore.newVariableEntry(new Path("TEST_DEPRECATED_READ_ONLY"), null, null);
+		IClasspathEntry[] entries = project.getRawClasspath();
+		int length = entries.length;
+		System.arraycopy(entries, 0, entries = new IClasspathEntry[length+1], 0, length);
+		entries[length] = variable;
+		project.setRawClasspath(entries, null);
+
+		// verify markers
+		waitForAutoBuild();
+		IMarker[] markers = project.getProject().findMarkers(IJavaModelMarker.BUILDPATH_PROBLEM_MARKER, false, IResource.DEPTH_ZERO);
+		sortMarkers(markers);
+		assertMarkers("Unexpected marker(s)",
+			"Classpath variable 'TEST_DEPRECATED_READ_ONLY' in project P1 is deprecated: 'A deprecated and read-only initializer'",
+			markers);
+		assertEquals("Marker on deprecated variable should be a WARNING", IMarker.SEVERITY_WARNING, markers[0].getAttribute(IMarker.SEVERITY, -1));
+	} finally {
+		VariablesInitializer.reset();
+		deleteProject("P1");
+	}
+}
+
+/**
  * @see "https://bugs.eclipse.org/bugs/show_bug.cgi?id=61872"
  */
 public void testUserLibraryInitializer1() throws CoreException {
#P org.eclipse.jdt.core
Index: model/org/eclipse/jdt/internal/core/JavaProject.java
===================================================================
RCS file: /cvsroot/eclipse/org.eclipse.jdt.core/model/org/eclipse/jdt/internal/core/JavaProject.java,v
retrieving revision 1.379
diff -u -r1.379 JavaProject.java
--- model/org/eclipse/jdt/internal/core/JavaProject.java	31 Jan 2007 07:47:25 -0000	1.379
+++ model/org/eclipse/jdt/internal/core/JavaProject.java	31 Jan 2007 18:24:06 -0000
@@ -37,6 +37,7 @@
 import org.eclipse.core.runtime.CoreException;
 import org.eclipse.core.runtime.IPath;
 import org.eclipse.core.runtime.IProgressMonitor;
+import org.eclipse.core.runtime.IStatus;
 import org.eclipse.core.runtime.Path;
 import org.eclipse.core.runtime.Preferences;
 import org.eclipse.core.runtime.QualifiedName;
@@ -786,7 +787,8 @@
 			default:
 				IPath path = status.getPath();
 				if (path != null) arguments = new String[] { path.toString() };
-				if (JavaCore.ERROR.equals(getOption(JavaCore.CORE_INCOMPLETE_CLASSPATH, true))) {
+				if (JavaCore.ERROR.equals(getOption(JavaCore.CORE_INCOMPLETE_CLASSPATH, true)) &&
+					status.getSeverity() != IStatus.WARNING) {
 					severity = IMarker.SEVERITY_ERROR;
 				} else {
 					severity = IMarker.SEVERITY_WARNING;