### Eclipse Workspace Patch 1.0
#P org.eclipse.jdt.core.tests.model
Index: src/org/eclipse/jdt/core/tests/model/JavaProjectTests.java
===================================================================
RCS file: /cvsroot/eclipse/org.eclipse.jdt.core.tests.model/src/org/eclipse/jdt/core/tests/model/JavaProjectTests.java,v
retrieving revision 1.100
diff -u -r1.100 JavaProjectTests.java
--- src/org/eclipse/jdt/core/tests/model/JavaProjectTests.java	27 Jun 2008 16:02:38 -0000	1.100
+++ src/org/eclipse/jdt/core/tests/model/JavaProjectTests.java	18 Aug 2008 11:17:49 -0000
@@ -961,6 +961,23 @@
 	}
 }
 /*
+ * Ensures that an internal jar referred to with its OS-path is not part of the non-Java resources
+ */
+public void testGetNonJavaResources5() throws CoreException {
+	try {
+		IJavaProject project = this.createJavaProject("P", new String[] {"src"}, "bin");
+		IFile file = createFile("/P/lib.jar", "");
+		addLibraryEntry(project, file.getLocation(), false/*not exported*/);
+		assertResourcesEqual(
+			"Unexpected non-java resources for project",
+			"/P/.classpath\n" + 
+			"/P/.project",
+			project.getNonJavaResources());
+	} finally {
+		this.deleteProject("P");
+	}
+}
+/*
  * Ensures that getRequiredProjectNames() returns the project names in the classpath order
  * (regression test for bug 25605 [API] someJavaProject.getRequiredProjectNames(); API should specify that the array is returned in ClassPath order)
  */
#P org.eclipse.jdt.core
Index: model/org/eclipse/jdt/internal/core/JavaProjectElementInfo.java
===================================================================
RCS file: /cvsroot/eclipse/org.eclipse.jdt.core/model/org/eclipse/jdt/internal/core/JavaProjectElementInfo.java,v
retrieving revision 1.55
diff -u -r1.55 JavaProjectElementInfo.java
--- model/org/eclipse/jdt/internal/core/JavaProjectElementInfo.java	27 Jun 2008 16:03:50 -0000	1.55
+++ model/org/eclipse/jdt/internal/core/JavaProjectElementInfo.java	18 Aug 2008 11:17:50 -0000
@@ -134,7 +134,8 @@
 							String resName = res.getName();
 
 							// ignore a jar file on the classpath
-							if (isClasspathResolved && isClasspathEntryOrOutputLocation(resFullPath, classpath, projectOutput)) {
+							if (isClasspathResolved && 
+									isClasspathEntryOrOutputLocation(resFullPath, res.getLocation()/* see https://bugs.eclipse.org/bugs/show_bug.cgi?id=244406 */, classpath, projectOutput)) {
 								break;
 							}
 							// ignore .java file if src == project
@@ -164,7 +165,7 @@
 
 							// ignore non-excluded folders on the classpath or that correspond to an output location
 							if ((srcIsProject && !Util.isExcluded(res, inclusionPatterns, exclusionPatterns) && Util.isValidFolderNameForPackage(res.getName(), sourceLevel, complianceLevel))
-									|| (isClasspathResolved && isClasspathEntryOrOutputLocation(resFullPath, classpath, projectOutput))) {
+									|| (isClasspathResolved && isClasspathEntryOrOutputLocation(resFullPath, res.getLocation(), classpath, projectOutput))) {
 								break;
 							}
 							// else add non java resource
@@ -264,11 +265,12 @@
 	/*
 	 * Returns whether the given path is a classpath entry or an output location.
 	 */
-	private boolean isClasspathEntryOrOutputLocation(IPath path, IClasspathEntry[] resolvedClasspath, IPath projectOutput) {
+	private boolean isClasspathEntryOrOutputLocation(IPath path, IPath location, IClasspathEntry[] resolvedClasspath, IPath projectOutput) {
 		if (projectOutput.equals(path)) return true;
 		for (int i = 0, length = resolvedClasspath.length; i < length; i++) {
 			IClasspathEntry entry = resolvedClasspath[i];
-			if (entry.getPath().equals(path)) {
+			IPath entryPath;
+			if ((entryPath = entry.getPath()).equals(path) || entryPath.equals(location)) {
 				return true;
 			}
 			IPath output;